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You are here: Home / functional medicine / Connecting Gut Dysfunction with Fibromyalgia

Connecting Gut Dysfunction with Fibromyalgia

functional medicine· gut health· health· immune· Pain· Uncategorized

2 Jun

Fibromyalgia (FM) 

Fibromyalgia is a medical condition characterized by widespread pain. It is also associated with heightened pain response to normal pressure. While one of the main characteristics of Fibromyalgia is widespread pain, many people with FM also suffer from fatigue, sleep, memory, GI distress, and mood issues.  Fibromyalgia is one of the most common chronic pain conditions. It is estimated this disorder affects 10 million people in the US and an estimated 3-6% of the world’s population. Fibromyalgia is most common in women, and it also occurs in men and, in some cases, children. There also seems to be a genetic component to Fibromyalgia as several links to FM have been linked to family history. (1)

Diagnosing Fibromyalgia

Diagnosing Fibromyalgia can be tricky. To date, there is no current specific lab value that can directly link to the debilitating fibromyalgia diagnosis. In the past, Doctors diagnosed FM on a tender point test adopted from the American College of Rheumatology. On this test, if 11 out of 18 spots had to test positive for tenderness or pain, this would lead to a diagnosis of fibromyalgia.

Picture from the criteria established from The American College of Rheumatology 1990. Criteria initially established a foundation for plausible diagnosis of Fibromyalgia.

While the above trigger points can be useful for helping a diagnosis of fibromyalgia, they’re not all-inclusive. Another problem with the tenderness spot test is that these trigger point areas can be sensitive or painful from numerous things (working out, dehydration, lack of sleep, etc.) and making an objective diagnosis difficult based on subjective findings. Diagnosis of fibromyalgia is usually a “diagnosis of exclusion.” For example, a doctor will rule out every other possible differential diagnosis before coming after a patient having fibromyalgia (3). For example, a doctor will take a history of your symptoms, including fatigue, widespread pain, bowel issues, muscle pain, and more, to diagnose fibromyalgia after ruling out other major diseases from the history exam and lab analysis. 

While there are several different hypotheses for causes of fibromyalgia including mitochondrial dysfunction, oxidative damage, physical injury, arthritis, stress, giving birth, chemical imbalances, brain or spinal cord injury, and more, to date, there is no clear-cut pathway that leads to the progression of this debilitating pain syndrome named Fibromyalgia. What if, by looking at what causes another gut disorder, we could also find new treatment strategies to help with Fibromyalgia?

Could an overgrowth issue (SIBO) be the culprit of your FIbromyalgia symptoms?

— Robert Fredrickson DNM, DC (@DrRfredrickson) May 30, 2021

Different types of probiotics for different clinical applications

In 2021, I have been diving into the research surrounding the differences in two classes of probiotics- Soil/Spore based probiotics and Commensal probiotics. While researching the mechanism of soil-based probiotics, there are actually many great studies showing their clinical use for the treatment of SIBO. SIBO (Small Intestinal Bacterial Overgrowth) is theorized as the translocation of colonic bacteria (bacteria in the large intestine) translocated into areas of the small intestines. SIBO is known to cause symptoms of gas, bloating, cramping, pain, indigestion, early feelings of fullness, diarrhea, constipation, cramping, and more. Some individuals also find that regular probiotics also produce more GI discomfort. This is possibly due to regular probiotics adding to more overgrowth of the small bowel. This finding of bloating from regular probiotics could also lead to a decision to try a course of Spore Based Probiotics to try to balance the overgrowth (SIBO) dysbiosis.

SIBO Potential causes

SIBO like fibromyalgia has some difficulties testing for an accurate diagnosis. But some proposed mechanisms for causes of SIBO include:

  • Slow Motility-muscular peristaltic activity of the small intestines is dysfunctional and doesn’t fully allow feces and waste to be normally excreted properly.
  • Hypochloridia-low stomach acid- leads to an improper breakdown of pathogenic bacteria and doesn’t fully digest macro and micronutrients.
  • A dysfunctional immune system: doesn’t allow for proper identification of harmful pathogens
  • pH changes in the small bowel
  • Anatomy or bowel resection issues
  • Unresolved IBS or other bowel disorders
  • Irregular or inconsistent bowel movements
  • History of long term antibiotic use

It’s also interesting to note that in a 2017 study they found that over 70-80% of IBS patients had a correlation with SIBO.

FIBromyalgia/sibo connection

Fibromyalgia patients routinely suffer from extreme muscle and joint pain but also have associated GI-related issues. I recently came across a few articles directly connecting fibromyalgia to SIBO. This is exciting! Could treating the root cause of what causes SIBO also help us to get the root cause of fibromyalgia?

Let’s look into what the literature says. The study I am highlighting is from the B&J journal- Annals of Rheumatic Diseases. This 2008 study found that 42 out of 42 fibromyalgia patients ALL had correlated cases of SIBO. What’s more, is they studied the amount of pain from fibromyalgia and found that the more pain fibro patients had, the more overgrowth (SIBO) was indicated by their hydrogen breath test.

How does SIBO cause pain in the body?

Studies looking at the effects of bad bacteria (gram-negative) that carry known endotoxins like lipopolysaccharide (LPS) have been shown to increase pain (hyperalgesia) in animal models (13). When bad bacteria has translocated or moved to areas in the small intestines in higher amounts not normally seen (SIBO), this has been shown to increase both liver and systemic inflammation. This also explains why higher amounts of overgrowth of bad bacteria, showed greater amounts of pain in moderate to severe fibromyalgia patients. (5)

So is SIBO causing Fibromyalgia, or is Fibromyalgia a result of unresolved SIBO? (11). And why aren’t all fibro patients being evaluated and treated for GI issues as the standard of care? (11)

It’s the chicken or the egg scenerio. Here are a few thoughts and obersations.

Research on Fibromyalgia patients will show a majority of fibro patients are taking NSAIDs for pain. This study confirmed that over 2/3 of NSAID users would have some degree of intestinal permeability (IP), aka leaky gut, mucosal toxicity (protective barrier), mitochondrial toxicity, and over-activation of the immune system (10). So what this means is that a counter pain medication actually leaves your gut vulnerable to leaky gut issues. Could chronic use of NSAIDs be a contributing factor to SIBO as well?

While the above study over NSAIDs will certainly leave fibromyalgia patients frustrated about what they can do for their pain if NSAIDs are potentially making their gut issues worse. If they take the NSAIDs to help with the pain, they are left with other harmful effects on their gut. What is the person to do? First, don’t stress yourself out more! Stress only makes the pain worse through the over-activation of the sympathetic nervous system. Know, there are natural options that can help. I will highlight some of my favorite vitamins and botanicals below to help support painful Fibromyalgia while also treating the underlying GUT dysfunction.

A New Alternative to Supporting Patients with Fibromyalgia

Consider the following suggestions below for a possible SIBO/FIBROMYALGIA support protocol. This should be done for 3-6 months under the supervision of a doctor.

  • Rifaximin (anti-biotic) need RX for SIBO
  • Spore/Soil Based probiotic organisms for a course of 3-6 months
  • Low FODMAP diet
  • Motility support-artichoke, ginger, etc
  • Nonfermentable prebiotics-“flavo biotics”
  • Natural anti-microbials
  • BioFilm disruptors 1-2months
  • Mitochondrial Support Products
  • Digestive Enzymes to increase stomach acidity before meals. Can also use diluted apple cider vinegar before meals as well.
  • Magnesium and Malic Acid- from food and supplements combined (goal 500mg-800mg daily for women)
  • Full Spectrum Turmeric for natural pain relief 500mg-1000mg daily
  • Antioxidants: Vitamin C and L-Glutathione
  • Stress management
  • Quality sleep-7-8 hours minimum.
  • *Important to note that if SIBO suspected, use SPORE-based probiotics first, then after 3-6 months transition back to normal diet along with commensal conventional probiotics in order to maintain optimum microbial diversity.

*Disclaimer* For information purposes only. We always advise working with your personal health care provider for individualized personal care. Also, these are for supporting conditions, we are not tying disease states to treatments

    References

    1. Prevalence of Fibromyalgia https://fibroandpain.org/prevalence-2#:~:text=The%20disorder%20affects%20an%20estimated,children%20of%20all%20ethnic%20groups.
    2. Chakrabarty S, Zoorob R. Fibromyalgia. Am Fam Physician. 2007 Jul 15;76(2):247-54. PMID: 17695569.
    3. Fibromyalgia Diagnosis: How Doctors Diagnose Fibromyalgia Here’s what to expect at the doctor’s office when you suspect you might have fibromyalgia. www.creakyjoints.org
    4. Ghoshal UC, Shukla R, Ghoshal U. Small Intestinal Bacterial Overgrowth and Irritable Bowel Syndrome: A Bridge between Functional Organic Dichotomy. Gut Liver. 2017;11(2):196-208. doi:10.5009/gnl16126
    5. Pimentel M, Wallace D, Hallegua D, et alA link between irritable bowel syndrome and fibromyalgia may be related to findings on lactulose breath testingAnnals of the Rheumatic Diseases 2004;63:450-452.
    6. Goebel A, Buhner S, Schedel R, Lochs H, Sprotte G. Altered intestinal permeability in patients with primary fibromyalgia and in patients with complex regional pain syndrome. Rheumatology (Oxford). 2008;47(8):1223-1227. doi:10.1093/rheumatology/ken140
    7. Othman M, Agüero R, Lin HC. Alterations in intestinal microbial flora and human disease. Curr Opin Gastroenterol. 2008;24(1):11-16. doi:10.1097/MOG.0b013e3282f2b0d7
    8. Cavalli G, Cariddi A, Ferrari J, et al. Living with fibromyalgia during the COVID-19 pandemic: mixed effects of prolonged lockdown on the well-being of patients. Rheumatology (Oxford). 2021;60(1):465-467. doi:10.1093/rheumatology/keaa738
    9. Hannu T, Kauppi M, Tuomala M, Laaksonen I, Klemets P, Kuusi M. Reactive arthritis following an outbreak of Campylobacter jejuni infection. J Rheumatol. 2004;31(3):528-530.
    10. Fortun PJ, Hawkey CJ. Nonsteroidal antiinflammatory drugs and the small intestine. Curr Opin Gastroenterol. 2005;21(2):169-175. doi:10.1097/01.mog.0000153314.51198.58
    11. Is Fibromyalgia caused by leaky gut and SIBO? Chris Kresser 2019
    12. Wallace DJ, Hallegua DS. Fibromyalgia: the gastrointestinal link. Curr Pain Headache Rep. 2004;8(5):364-368. doi:10.1007/s11916-996-0009-z
    13. Walker K, Dray A, Perkins M. Hyperalgesia in rats following intracerebroventricular administration of endotoxin: effect of bradykinin B1 and B2 receptor antagonist treatment. Pain. 1996;65(2-3):211-219. doi:10.1016/0304-3959(95)00195-6

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🧠 Chronic stress depletes magnesium
💥 Low magnesium makes stress worse
🔁 Then your body dumps even more through the kidneys

It becomes a loop 🔁
Stress drains magnesium → low magnesium amplifies stress.

To break the stress depleting magnesium cycle- try this 👇
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    Feeling stressed for “no reason”? Tension, restles
    Feeling stressed for “no reason”?
Tension, restless sleep, anxiety that won’t chill out?

It might not just be stress — it could be low magnesium.

Here’s what most people never hear:
📉 Chronic stress depletes magnesium
📉 Low magnesium makes stress worse
➡️ Then your body dumps even more magnesium through your kidneys

It creates a loop:
Stress drains magnesium → low magnesium amplifies stress.

So how do we break the stress depleting magnesium cycle?

1) Start With Food Sources

Build magnesium into every day by prioritizing:

🥑 Avocado
🥬 Spinach & leafy greens
🫘 Black beans, lentils
🍫 Dark chocolate (70%+)
🥜 Almonds, cashews, pumpkin seeds
🐟 Wild salmon
🌾 Whole grains (oats, quinoa)

Aim to pair these with protein + healthy fats for stable blood sugar, which reduces stress hormone spikes.

2) Balance Your Stress Response Naturally

Simple daily habits can dramatically reduce magnesium loss:

🌿 10 minutes of deep breathing (lowers cortisol)
🚶‍♂️ Weighted walking or strength training (not excessive cardio)
☀️ Morning light exposure (hormone balance & sleep quality)
📱 Digital boundaries (less stimulation → calmer brain)

Small consistent habits = big changes in stress chemistry.

⸻

3) Consider Supplementing (If Needed)

Food + lifestyle first.
But if you’re already depleted, supplements can speed results — especially for:

😴 Sleep support
😌 Anxiety & tension
💪 Muscle recovery
🧠 Cognitive performance
🔥 High-stress lifestyles

Quality matters — different forms do different jobs, and not all products are created equal.

⸻

A Helpful Resource

📘 Search “Magnesium Answers” on Amazon
(Also makes an awesome Christmas gift 😉)

⸻

Important note

Even though the book is on Amazon, many supplements there are not properly tested.
That’s why I only recommend professional-grade companies that are:

🔹 Clinically trusted
🔹 Third-party tested
🔹 Clinical doses based on studies 

To access my favorite brands and my go-to magnesium protocols:

🔗 Click the link in my bio to visit our Fullscript store
✨ Automatic discounts + quality 3rd party tested products.

#stressrelief #magnesium #magnesiumanswers


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#HealthShift #functionalmedicine #maketheshift #wellshift #georgetowntx #weightloss #healthtips #modaymotivation


    What type of magnesium blend product you may want
    What type of magnesium blend product you may want to avoid.

When reading magnesium blend labels, the forms are listed from greatest to least — so if you see oxide first, most of your magnesium is probably the cheapest, least absorbable form. 🛑

I prefer blends with just 2–3 forms of magnesium that are known for higher absorption (like glycinate, malate, or threonate) instead of a long list packed with cheaper less bioavailable forms .

✅ Quality matters more than quantity.

Follow for more magnesium tips, and check out my book Magnesium Answers for the full breakdown on choosing the right form for your needs, and how to stay in magnesium balance for life. 📖✨

#Magnesium #MagnesiumSupplements #MagnesiumGlycinate #SupplementsThatWork #FunctionalMedicine #HealthTips #MagnesiumBenefits #BetterSupplements #HolisticHealth #MagnesiumAnswers #WellnessTips #MineralBalance #Supplements101 #IntegrativeHealth #MagnesiumMatters


    Want to keep the weight off and protect your metab
    Want to keep the weight off and protect your metabolism during a weight loss phase? A weighted vest might be your secret weapon. 🔥

Weighted vest walking is all the rage right now… but is there research to back it? 🦺👟

Actually—yes. 📚 A few key studies show that adding a weighted vest during a weight loss phase can:
✅ Preserve your metabolism so it doesn’t crash
✅ Protect muscle mass while you drop fat
✅ Cut weight regain long after the diet ends

In addition to regular resistance training, this could be a smart strategy if you’re trying to maximize your muscle and metabolism for later—especially if you’re on a structured fat loss plan or coming off GLP-1 medications.

📩 Comment “VEST” and I’ll send you the research + tips on how to make it part of your plan.

Shift your health. Shift your life.

➡️Gravitostat Theory study (eClinicalMedicine, 2020) – PMID: 33033796

➡️Weighted vest long-term maintenance study (International Journal of Obesity, 2025)
 DOI: 10.1038/s41366-025-01468-7

#WellShift #WeightLossTips #MetabolismBoost #WeightedVest #MusclePreservation #WeightLossJourney #GLP1 #GLP1WeightLoss #HealthyLifestyle #LoseFatKeepMuscle #FunctionalMedicine #StrengthForLife #MetabolicHealth


    GLP-1 Medications & Magnesium: What You Need to Kn
    GLP-1 Medications & Magnesium: What You Need to Know

💉 GLP-1 medications (like semaglutide or tirzepatide) are a class of drugs that mimic the glucagon-like peptide-1 hormone to regulate blood sugar, slow digestion, and reduce appetite — making them highly effective for weight loss and metabolic health.

But here’s what’s not talked about enough 👇

⚠️ These meds can increase your risk of magnesium deficiency — a nutrient most people are already low in. Why? Because you’re eating less, getting less micronutrients, and processing nutrients differently.

Low magnesium signs =
• Muscle cramps
• Fatigue
• Brain fog
• Sleep disturbances
• Slowed recovery
• And yes — constipation

💡 Here’s what I recommend:
🥦 Eat a diet focused on whole, unprocessed foods
💊 Take a daily magnesium supplement — highly absorbable forms like malate, glycinate, or threonate are best
🚽 Keep magnesium citrate on hand if you’re experiencing GLP-1-related constipation — it works quickly and safely

📘 Want to go deeper? My book Magnesium Answers is available now on Amazon — it’s your go-to guide to fixing deficiency and optimizing health the right way.

I’ve been talking about this a lot lately and have targeted nutrition and supplement protocols for people on GLP-1s — designed to:

✅ Maintain micronutrient status
✅ Sustain lean body mass
✅ Prevent rebound weight gain if you stop taking the medication

👉 If you’re using GLP-1s and want extra nutrition  support, don’t hesitate to reach out. See you on the next one! 

#MagnesiumAnswers #GLP1Support #MagnesiumDeficiency #GLP1Nutrition #WeightLossSupport #MagnesiumMatters #DrRobertFredrickson #WellShift #FunctionalMedicine #LongevityMedicine



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